Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGGGGCTGCTGGGG
.(((((((..(..(((((....&)))))..)..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005632
GeneSymbolCAPN15
Binding site2139,2157
Score0.923
Seed1
Au0.324
Energy-18.7
Binding len18
Me-10.728
Phylopstem4.150715285714286
Phylopflank3.2948077737499997
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure