Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&GTGTGCCAAGAGTTCGATGT
((((...(((((((((((((.&)))))))))))))..)))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_005635
GeneSymbolSSX1
Binding site781,801
Score0.923
Seed0
Au0.632
Energy-21.1
Binding len20
Me-11.501
Phylopstem-0.4406605615384616
Phylopflank-0.05700308250000004
Longest consecutive pairings13
Position of longest consecutive pairings7
Pairings in 3prime end7
Position3UTR
2D Structure