Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGACCTTTCACGAACATGGGCATGGCTGCGGCTCCCTCGTCATCAGGTG
..(((((((((((.(((((..&.)))).).))))))))..............))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_005635
GeneSymbolSSX1
Binding site674,725
Score0.846
Seed1
Au0.456
Energy-21.2
Binding len34
Me-5.814
Phylopstem0.05486361599999998
Phylopflank0.29950475499999996
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end5
Position3UTR
2D Structure