Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAAGCCATGGCGATTCTTTTTGCTGTTGTTGCCAGGG
.(((((((.((((((((((...&.))))).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005638
GeneSymbolVAMP7
Binding site107,144
Score0.821
Seed1
Au0.485
Energy-20.8
Binding len20
Me-4.85
Phylopstem5.669216363636364
Phylopflank2.4273533912500005
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure