Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATGTATATTGTAAAGCAGGTG
(((((...(((((((((.((((&)))).)))))))))...))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005680
GeneSymbolTAF1B
Binding site1985,2008
Score0.846
Seed0
Au0.706
Energy-18.5
Binding len23
Me-9.696
Phylopstem-0.21685443333333332
Phylopflank-0.11584256624999997
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure