Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACGTGCCAGGC
.((((((((.....((((....&)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005686
GeneSymbolSOX13
Binding site3058,3071
Score0.923
Seed1
Au0.5
Energy-16.9
Binding len13
Me-13.353
Phylopstem0.5407772575
Phylopflank0.32481535000000006
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure