Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTTTTGGCGCGAAAGATGCCGGGTC
(((((((((....(((......&.)))....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005694
GeneSymbolCOX17
Binding site78,106
Score0.846
Seed1
Au0.397
Energy-15.7
Binding len18
Me-12.641
Phylopstem0.9589422222222223
Phylopflank1.555626717375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure