Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCGCCCTGCTCTTCACTGGCATTGCTGTGCTAGGA
.(((((((((((((((......&.)))))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005698
GeneSymbolSCAMP3
Binding site1051,1088
Score0.808
Seed1
Au0.471
Energy-21.1
Binding len18
Me-3.793
Phylopstem2.0582103125
Phylopflank3.7170229
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure