Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTATATTGTATGGCCT
....((((((((((((((....&)))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005724
GeneSymbolTSPAN3
Binding site3633,3649
Score0.846
Seed0
Au0.632
Energy-17.7
Binding len16
Me-9.547
Phylopstem-0.08020804000000001
Phylopflank-0.0035214075000000317
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end4
Position3UTR
2D Structure