Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGGGAGGGGACAGGATCTA
(((.((((...(((((((.((&)))))))))..)))).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_005727
GeneSymbolTSPAN1
Binding site1264,1284
Score0.815
Seed0
Au0.441
Energy-22.8
Binding len20
Me-12.093
Phylopstem0.5010528142857142
Phylopflank0.13678561374999998
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end7
Position3UTR
2D Structure