Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTGCCTACCTGCCAGGTT
((((((((......((((((((&)))))))).....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005730
GeneSymbolCTDSP2
Binding site3788,3810
Score0.846
Seed1
Au0.5
Energy-20.9
Binding len22
Me-14.554
Phylopstem5.0463531249999996
Phylopflank5.131636866250001
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure