Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATTTACATTCAGCCAGGG
.((((((....(((((((((..&)))))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005730
GeneSymbolCTDSP2
Binding site4419,4437
Score0.885
Seed1
Au0.515
Energy-18.0
Binding len18
Me-11.231
Phylopstem2.4670033333333334
Phylopflank2.9255474349999995
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure