Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTAGCGTTGTGGTGCCAC
...((((((((((((((((...&)))).))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005730
GeneSymbolCTDSP2
Binding site2836,2855
Score0.846
Seed0
Au0.471
Energy-17.9
Binding len19
Me-6.515
Phylopstem0.45883333333333326
Phylopflank0.5605125000000001
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure