Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAAGCTGACATTGTGTTGCGCCGGGTG
((((((((((((((((......&.)))))))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005760
GeneSymbolCEBPZ
Binding site1751,1778
Score1.0
Seed1
Au0.559
Energy-21.7
Binding len21
Me-3.938
Phylopstem4.067084
Phylopflank4.5632189387499995
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end2
PositionCDS
2D Structure