Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATTGTAAAGGGATACTGCCAGT
..(((((((((((((((((...&))))))))))).........)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005761
GeneSymbolPLXNC1
Binding site5474,5501
Score0.923
Seed1
Au0.588
Energy-21.9
Binding len27
Me-4.957
Phylopstem0.9613831730769231
Phylopflank1.74345380905
Longest consecutive pairings11
Position of longest consecutive pairings16
Pairings in 3prime end5
Position3UTR
2D Structure