Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTTTTTGCTGCTGCTTGTAAGGCAGGTA
(((((.(.(((((.((((....&.))))))))).).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005776
GeneSymbolCNIH1
Binding site1693,1723
Score0.846
Seed0
Au0.647
Energy-18.6
Binding len19
Me-9.009
Phylopstem0.46025119999999997
Phylopflank0.16725900124999998
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure