Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACGTCCTGTGCCAGGC
.(((((((((..((((......&))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005804
GeneSymbolDDX39A
Binding site323,339
Score0.846
Seed1
Au0.338
Energy-18.8
Binding len16
Me-9.965
Phylopstem6.100555555555556
Phylopflank4.7558350735
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure