Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACAGTTGGCATGCCAGGG
.((((((((.((((((......&))).)))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005808
GeneSymbolCTDSPL
Binding site4363,4381
Score0.846
Seed1
Au0.5
Energy-17.8
Binding len18
Me-5.036
Phylopstem1.4517793632499998
Phylopflank1.3485007741250001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure