Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTAGGATGAGACAGAAAATGAAAGCATGTTGTTTGCCAGGA
.(((((((.(((((((......&.))))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005839
GeneSymbolSRRM1
Binding site3302,3344
Score1.0
Seed1
Au0.618
Energy-19.8
Binding len17
Me-4.85
Phylopstem1.1371885714285714
Phylopflank1.88342938125
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end2
Position3UTR
2D Structure