Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCTGGCAGAGCAAGCGCACTGAGGGCATTGTGTAGGCGGGG
.((((.((((((((((......&.))))))))).).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005855
GeneSymbolRAMP1
Binding site463,506
Score0.846
Seed0
Au0.294
Energy-18.8
Binding len18
Me-5.694
Phylopstem3.483649090909091
Phylopflank1.1935409362499998
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end2
PositionCDS
2D Structure