Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTTTAACTTCCATTGTTCAGATTTTAGGTTTATCTAGTGAAATTGTGCCAGGTA
((((((((((.....(((((..&.))))).......)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005859
GeneSymbolPURA
Binding site10443,10499
Score0.808
Seed1
Au0.662
Energy-19.6
Binding len24
Me-12.991
Phylopstem0.68860191
Phylopflank1.2187832512499996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure