Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGCTGGGCTGAGGC
....(((.((((((.((((((&))))))..))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_005861
GeneSymbolSTUB1
Binding site1226,1244
Score0.846
Seed0
Au0.456
Energy-25.6
Binding len18
Me-12.596
Phylopstem0.8423653333333334
Phylopflank0.185975165625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure