Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTACAGCGGCTGCCAGGA
.(((((((..(..((((.(...&).))))..)..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005886
GeneSymbolKATNB1
Binding site1088,1107
Score0.923
Seed1
Au0.353
Energy-18.1
Binding len19
Me-10.728
Phylopstem2.582351857142857
Phylopflank4.855853612499999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure