Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCTGTGTTGTGCCGGGA
.(((((((((((..((......&))..))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005894
GeneSymbolCD5L
Binding site281,298
Score0.846
Seed1
Au0.338
Energy-17.6
Binding len17
Me-5.939
Phylopstem-0.27905825
Phylopflank0.101867807375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure