Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTTCATTGTATTCTCAGGA
.(((((.((((((((.((((((&)))))).)))))))).).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005909
GeneSymbolMAP1B
Binding site3552,3575
Score1.0
Seed0
Au0.647
Energy-19.7
Binding len23
Me-5.57
Phylopstem1.4121533125
Phylopflank2.8196044149999997
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure