Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTTCCAGTATGCCAGC
..(((((((((...........&.))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005919
GeneSymbolBORCS8-MEF2B
Binding site448,465
Score1.0
Seed1
Au0.441
Energy-15.7
Binding len11
Me-11.418
Phylopstem0.32441580577777773
Phylopflank-0.26769282554999996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure