Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATATTGTGGTTATGGG
.((((((.(((((((((((...&))))))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005941
GeneSymbolMMP16
Binding site10456,10475
Score0.846
Seed1
Au0.75
Energy-17.0
Binding len19
Me-6.107
Phylopstem6.578041818181819
Phylopflank5.5413910612500015
Longest consecutive pairings15
Position of longest consecutive pairings4
Pairings in 3prime end5
Position3UTR
2D Structure