Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGAGGGTTTAATCCTTTTAGGGCCTT
((.(((((.(((((((((((.&))))))))))).........))))).)).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_005941
GeneSymbolMMP16
Binding site4885,4914
Score1.0
Seed0
Au0.618
Energy-23.1
Binding len29
Me-6.552
Phylopstem0.7224967272727274
Phylopflank0.539791376625
Longest consecutive pairings11
Position of longest consecutive pairings18
Pairings in 3prime end7
Position3UTR
2D Structure