Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGGCAGTTTTTGTCTGCTGTAAGTGTCTTAACCTAGGGAAGGGTTA
.((((((((((((((((((((&))))))).)).........)))))...................)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_005941
GeneSymbolMMP16
Binding site11407,11457
Score0.827
Seed1
Au0.632
Energy-22.6
Binding len50
Me-3.793
Phylopstem0.49381972836734717
Phylopflank1.6194433072499999
Longest consecutive pairings7
Position of longest consecutive pairings43
Pairings in 3prime end8
Position3UTR
2D Structure