Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGCCCCATGAGCTGTGCCAAGTGTGCCCAGGG
.((((((((((...(((.(...&.).)))...))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005946
GeneSymbolMT1A
Binding site177,213
Score0.846
Seed1
Au0.397
Energy-17.1
Binding len21
Me-9.286
Phylopstem0.6060394727272729
Phylopflank1.844180895
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end4
PositionCDS
2D Structure