Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCAAGTGTGCCCAGGG
.((((((((((..(((......&))).))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005949
GeneSymbolMT1F
Binding site224,240
Score0.846
Seed1
Au0.382
Energy-16.4
Binding len16
Me-8.429
Phylopstem1.821773518181818
Phylopflank1.78018991125
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end2
PositionCDS
2D Structure