Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCTGCATTGGTCACTCTCCTGTTCTCTGAGCCATTGCTCAGGG
.(((((((..((((((((((((&)))))))))))).........................))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005955
GeneSymbolMTF1
Binding site3975,4021
Score1.0
Seed1
Au0.544
Energy-20.9
Binding len46
Me-6.092
Phylopstem0.4239141416666667
Phylopflank0.15091633000000002
Longest consecutive pairings12
Position of longest consecutive pairings34
Pairings in 3prime end8
Position3UTR
2D Structure