Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACTCCATGTGCAGTGCACGGGTGCAGCTGCC
..(((((((((.((((.....&.)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001331066
GeneSymbolCCDC116
Binding site179,213
Score1.0
Seed1
Au0.353
Energy-21.8
Binding len16
Me-8.304
Phylopstem0.06115753888888888
Phylopflank0.38042633000000015
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure