Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&CGGTAGCCAAAAGTAATGAA
..((((((((((((((((.((&))))).))))))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_005982
GeneSymbolSIX1
Binding site3913,3933
Score0.846
Seed1
Au0.618
Energy-18.0
Binding len20
Me-4.957
Phylopstem0.4844104
Phylopflank0.39173528999999996
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure