Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGACCCTCAGCTGGTGCCAGGG
.((((((((.............&.)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005998
GeneSymbolCCT3
Binding site1316,1338
Score0.846
Seed1
Au0.338
Energy-15.8
Binding len10
Me-14.322
Phylopstem4.12128725
Phylopflank4.39336948625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure