Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTCATGTATGCCAAGCGGG
.((((((((((.(((.(((((.&))))))))))))))))...)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006001
GeneSymbolTUBA3C
Binding site1262,1284
Score0.885
Seed1
Au0.441
Energy-19.2
Binding len22
Me-7.373
Phylopstem3.736664615384615
Phylopflank3.804863664999999
Longest consecutive pairings16
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure