Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGTGCCAGGC
.((((((((....(((((....&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006015
GeneSymbolARID1A
Binding site2538,2552
Score0.923
Seed1
Au0.338
Energy-18.9
Binding len14
Me-12.497
Phylopstem0.5443557124999999
Phylopflank1.0203545275000003
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure