Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAGCCTCTGCGGGGAAGTGCCGGGG
.((((((((....((((((...&.)))))).....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006041
GeneSymbolHS3ST3B1
Binding site10,39
Score0.846
Seed1
Au0.353
Energy-20.8
Binding len21
Me-12.497
Phylopstem0.5594096249999999
Phylopflank0.46865863041666667
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure