Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGAATAAGCCCACGAAAGGAAAGGGCTCTCAAGGGCTCTT
(((((((..((((((((((((&)))))))...................)))))....)))).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_006043
GeneSymbolHS3ST2
Binding site1542,1586
Score0.923
Seed1
Au0.485
Energy-24.4
Binding len44
Me-7.308
Phylopstem2.098740032258064
Phylopflank2.1112016487500003
Longest consecutive pairings7
Position of longest consecutive pairings37
Pairings in 3prime end8
PositionCDS
2D Structure