Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATCTGCATGTGTTGTGGGATGGGCCTGGTA
(((.(((((((.(((((((((.&)))))))))))))..........))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006065
GeneSymbolSIRPB1
Binding site2855,2886
Score0.846
Seed0
Au0.5
Energy-18.2
Binding len31
Me-10.316
Phylopstem-0.07295295555555555
Phylopflank-0.42197927625
Longest consecutive pairings13
Position of longest consecutive pairings18
Pairings in 3prime end7
Position3UTR
2D Structure