Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGACAAATACAGCTTCAGCCAGGTG
(((((((......((((.....&.))))......))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006065
GeneSymbolSIRPB1
Binding site4967,4997
Score0.923
Seed1
Au0.632
Energy-16.0
Binding len19
Me-16.011
Phylopstem0.9069394285714285
Phylopflank0.6044515187499999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure