Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTTGACTATCTACAATGTGCTAGGTA
((((((((((...(((((((..&.))))))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006080
GeneSymbolSEMA3A
Binding site6514,6543
Score0.846
Seed1
Au0.618
Energy-22.2
Binding len20
Me-11.398
Phylopstem4.8944597
Phylopflank5.128251737499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure