Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATTTGCTCAGTGCCAGGTC
(((((((((.....(((((((.&)))))))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006080
GeneSymbolSEMA3A
Binding site1075,1095
Score0.846
Seed1
Au0.559
Energy-19.2
Binding len20
Me-13.498
Phylopstem-0.10551466666666666
Phylopflank-0.33984935962499996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure