Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCAGCCGGGAAAGCCAGGGTGTGCCGGGC
.((((((((((..((.......&.))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006105
GeneSymbolRAPGEF3
Binding site2888,2919
Score1.0
Seed1
Au0.338
Energy-20.5
Binding len16
Me-8.662
Phylopstem1.2294751400000001
Phylopflank2.2863066550000006
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure