Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTGGAGGCGAGCTGCTCTGTGTGCCTGGA
.((.((((((((..((((.(((&.)))))))..)))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001369521
GeneSymbolTRIM39
Binding site299,330
Score0.846
Seed0
Au0.485
Energy-20.4
Binding len22
Me-8.971
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure