Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGAGGATCGCTTGAACCTGGGAGGTTGAGGCTGCAGTCAGCCATGGTCA
.((((((((((((((((((((&)))))))........................)))))))))........)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_006112
GeneSymbolPPIE
Binding site2330,2383
Score0.846
Seed1
Au0.426
Energy-31.0
Binding len53
Me-3.793
Phylopstem0.0905018461538462
Phylopflank0.06922491750000004
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure