Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACAGTGTACTGCCAGGA
.(((((((((((.(((......&))).)))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006120
GeneSymbolHLA-DMA
Binding site199,216
Score0.846
Seed1
Au0.441
Energy-18.8
Binding len17
Me-5.082
Phylopstem-0.48523916666666667
Phylopflank0.44407577875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure