Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACAGAGTGCCAGGG
.((((((((....((((((...&))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006125
GeneSymbolARHGAP6
Binding site3178,3195
Score0.846
Seed1
Au0.368
Energy-19.2
Binding len17
Me-12.497
Phylopstem0.7893889999999999
Phylopflank0.35754683
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure