Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGTCAAATGAGAGTAATCATGCCCACCCTCATTGTCATGCCAGA
..(((((((((((((.((....&.)))))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_006154
GeneSymbolNEDD4
Binding site4680,4727
Score1.0
Seed1
Au0.559
Energy-19.6
Binding len18
Me-5.19
Phylopstem2.8639726285714286
Phylopflank3.191154180000001
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end3
Position3UTR
2D Structure