Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCAGCAACTGTTAGCTGGGAA
((.(((((((((((((..(((&)))..)))))))).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001369532
GeneSymbolNTRK2
Binding site4050,4073
Score0.846
Seed0
Au0.515
Energy-20.9
Binding len23
Me-5.495
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
Position3UTR
2D Structure